Metamenu

Phenotypic trait predictions

Trait prediction parameters

RefSeq genome: Alcanivorax borkumensis

Legend:  + = trait present  - = trait absent

Model name Prediction result Prediction confidence Balanced accuracy Model description
but - 0.97 0.93 Organism is producing butyric_acid
ARCHAEA - 1.00 1.00 Organism is an archaeon (C)
SYMBIONT - 0.97 0.99 Organism has an obligate intracellular lifestyle (C)
for n.d. 0.99 0.78 Organism is producing formic_acid
sporulation - 1.00 0.96 Organism is capable of producing endospores for persistence (T)
AOB - 0.91 0.97 Organism is part of the clade of ammonia-oxidizing bacteria (E)
AUTO - 0.83 0.87 Organism is capable of growth with CO2 as sole carbon source (C)
lac_L + 1.00 0.81 Organism is producing L_lactic_acid
gram_stain - 0.99 0.98 Cells of organism stain Gram-positive (+) or Gram-negative (-) (T)
nif n.d. 0.62 0.92 Organism is capable of fixing N2 (E)
succ + 0.95 0.90 Organism is producing succinic_acid
NOB n.d. 0.73 0.81 Organism is part of the clade of nitrite-oxidizing bacteria (E)
glc_D - 0.92 0.82 Organism is utilizing D_glucose
h2 + 0.97 0.83 Organism is producing hydrogen
T4SS n.d. 0.51 0.91 Organism expresses a Type IV secretion system (C)
ac n.d. 0.98 0.77 Organism is producing acetic_acid
lac_D + 0.93 0.86 Organism is producing D_lactic_acid
phototrophy - 1.00 0.91
indole + 0.95 0.83 Organism is producing indole
actn_R - 0.92 0.90 Organism is producing R_acetoin
Sulfate_reducer - 0.96 0.96 Organism is capable of using sulfate as terminal electron acceptor (T)
THERM n.d. 1.00 0.79 Organism has a thermophilic lifestyle (C)
Saccharolytic - 0.98 0.91 Organism has a Saccharolytic lifestyle
Aerobe + 0.99 0.95 Organism is capable of aerobic respiration (T)
Asaccharolytic n.d. 0.98 0.75 Organism has a Asaccharolytic lifestyle
Fermentative + 0.99 0.82 Organism has a Fermentative lifestyle
isobut - 0.98 0.85 Organism is producing isobutyric_acid
HALO n.d. 0.90 0.70 Organism has a halophilic lifestyle (C)
nonfermentative n.d. 0.99 0.75 Organism has a nonfermentative lifestyle
T6SS n.d. 0.52 0.95 Organism expresses a Type VI secretion system (C)
isoval - 0.98 0.91 Organism is producing isovaleric_acid
THERM_OR_TOLERANT - 1.00 0.81 Organism has a thermophilic lifestyle or is thermotolerant (C)
btoh - 0.89 0.90 Organism is producing 1_butanol
PSYCHRO n.d. 0.97 0.63 Organism has a psychrophilic lifestyle (C)
etoh n.d. 0.91 0.78 Organism is producing ethanol
METHANOTROPH - 0.97 0.97 Organism is capable of growth with methane as the sole carbon source (C)
motility + 1.00 0.95 Organism is capable of self-propelled motion (T)
Anaerobe + 0.99 0.93 Organism is capable of anaerobic respiration (T)
T3SS n.d. 0.75 0.93 Organism expresses a Type III secretion system (C)