Training data

Legend:  + = trait present  - = trait absent

Genome accession Scientific name Trait presence
GCF_900188335.1 Tropicimonas sediminicola -
GCF_000715015.1 Erythrobacter longus +
GCF_001583505.1 Marichromatium gracile +
GCF_002356555.2 Halorhodospira halochloris +
GCF_000013345.1 Frankia casuarinae -
GCF_002937115.1 Rhodopila globiformis +
GCF_002937135.1 Rhodoblastus acidophilus +
GCF_001402875.1 Blastochloris viridis +
GCF_003206495.1 Gluconacetobacter entanii -
GCF_000740785.1 Paenirhodobacter enshiensis -
GCF_000012625.1 Synechococcus sp. CC9605 +
GCF_001938565.1 Rhodoferax antarcticus ANT.BR +
GCF_001663175.1 Porphyrobacter neustonensis +
GCF_003258905.1 Afifella marina DSM 2698 +
GCF_000374525.1 Amorphus coralli DSM 19760 -
GCF_000374645.1 Arhodomonas aquaeolei DSM 8974 -
GCF_000423125.1 Haliea salexigens DSM 19537 -
GCF_000423185.1 Inquilinus limosus DSM 16000 -
GCF_000423365.1 Maritalea myrionectae DSM 19524 -
GCF_000374145.1 Neomegalonema perideroedes DSM 15528 -
GCF_000422785.1 Nesiotobacter exalbescens DSM 16456 -
GCF_000422985.1 Porphyrobacter cryptus DSM 12079 +
GCF_000711985.1 Pararheinheimera texasensis DSM 17496 -
GCF_900114315.1 Roseomonas stagni DSM 19981 -
GCF_000425365.1 Rubritepida flocculans DSM 14296 +
GCF_000420765.1 Sandarakinorhabdus limnophila DSM 17366 +
GCF_900128895.1 Parasphingorhabdus marina DSM 22363 -
GCF_900112605.1 Thiohalospira halophila DSM 15071 -
GCF_000012525.1 Synechococcus elongatus PCC 7942 = FACHB-805 +
GCF_000026145.1 Bradyrhizobium sp. ORS 278 +
GCF_000009725.1 Synechocystis sp. PCC 6803 +
GCF_000257145.1 Rubrivivax gelatinosus CBS +
GCF_000384335.2 Hyphomicrobium sp. 99 -
GCF_003034995.1 Rhodobacter veldkampii DSM 11550 +
GCF_003034985.1 Cereibacter changlensis JA139 +
GCF_003034965.1 Rhodobacter blasticus DSM 2131 +
GCF_000520135.2 Rhodovulum sulfidophilum DSM 1374 +
GCF_001870675.1 Roseinatronobacter thiooxidans +
GCF_000964365.1 Acidisphaera rubrifaciens HS-AP3 +
GCF_000617865.1 Acidomonas methanolica NBRC 104435 -
GCF_000963885.1 Tanticharoenia sakaeratensis NBRC 103193 -
GCF_000342165.1 Pacificimonas flava -
GCF_000377225.1 Thioalkalivibrio sp. ALJ4 -
GCF_000585215.1 Imhoffiella purpurea +
GCF_001975705.1 Pelagibaca abyssi -
GCF_003173055.1 Zavarzinia compransoris -
GCF_000768555.3 Roseovarius mucosus DSM 17069 +
GCF_000590925.1 Roseibacterium elongatum DSM 19469 +
GCF_001677335.1 Porphyrobacter dokdonensis DSW-74 +
GCF_002088235.1 Oceanococcus atlanticus -
GCF_001620265.1 Defluviimonas alba -
GCF_000936425.1 Skermanella aerolata KACC 11604 -
GCF_900176485.1 Pseudooceanicola flagellatus -
GCF_900109495.1 Ectothiorhodospira marina +
GCF_000701585.1 Acidiphilium angustum ATCC 35903 +
GCF_000622425.1 Sulfitobacter guttiformis KCTC 32187 +
GCF_000521785.1 Roseivivax halodurans JCM 10272 +
GCF_900184815.1 Boseongicola aestuarii -
GCF_001262635.1 Aestuariivita boseongensis -
GCF_900142085.1 Shimia gijangensis -
GCF_001703635.1 Hoeflea olei +
GCF_000756375.1 Sphingopyxis sp. LC81 -
GCF_900302465.1 Ascidiaceihabitans donghaensis -
GCF_000697575.1 Kozakia baliensis -
GCF_000826835.1 Phaeobacter piscinae -
GCF_000007565.2 Pseudomonas putida KT2440 -
GCF_001614315.2 Halofilum ochraceum -
GCF_900114285.1 Methylocapsa palsarum -
GCF_000948415.1 Thalassospira sp. HJ -
GCF_001038505.1 Puniceibacterium sp. IMCC21224 -
GCF_000987765.1 Arsukibacterium sp. MJ3 -
GCF_001275035.1 Rheinheimera sp. KL1 -
GCF_003148775.1 Roseicyclus mahoneyensis +
GCF_000016005.1 Mycobacterium sp. JLS -
GCF_003014475.1 Shimia abyssi -
GCF_000196035.1 Listeria monocytogenes EGD-e -
GCF_002742025.1 Limnothrix sp. PR1529 +
GCF_002869745.1 Kandeliimicrobium roseum -
GCF_003751635.1 Inmirania thermothiophila -
GCF_001975725.1 Acidihalobacter ferrooxydans -
GCF_001634625.1 Croceicoccus sp. H4 -
GCF_003217255.1 Pseudoroseicyclus aestuarii -
GCF_900184895.1 Flavimaricola marinus -
GCF_001692215.1 Agrobacterium sp. B133/95 -
GCF_002355275.1 Rhizorhabdus dicambivorans -
GCF_003075415.1 Microvirga sp. KLBC 81 -
GCF_000014785.1 Alkalilimnicola ehrlichii MLHE-1 -
GCF_000006645.1 Yersinia pestis KIM10+ -
GCF_900103365.1 Afipia sp. GAS231 -
GCF_002742285.1 Amylibacter kogurei -
GCF_001719615.1 Neptunicoccus sediminis -
GCF_001879695.1 Nioella sediminis -
GCF_000006985.1 Chlorobaculum tepidum TLS +
GCF_900114895.1 Ectothiorhodospira mobilis +
GCF_000013285.1 Clostridium perfringens ATCC 13124 -
GCF_000011305.1 Corynebacterium efficiens YS-314 -
GCF_000011345.1 Thermosynechococcus elongatus BP-1 +
GCF_003313245.1 Primorskyibacter marinus -
GCF_002727065.1 Zhengella mangrovi -
GCF_002155655.1 Porphyrobacter sanguineus +
GCF_002213445.1 Xenophilus sp. AP218F -
GCF_000015865.1 Hungateiclostridium thermocellum ATCC 27405 -
GCF_000026125.1 Herminiimonas arsenicoxydans -
GCF_000012245.1 Pseudomonas syringae pv. syringae B728a -
GCF_000012445.1 Pseudomonas fluorescens Pf0-1 -
GCF_002855575.1 Tabrizicola sp. TH137 -
GCF_003129465.1 Sphingosinicella humi -
GCF_000006765.1 Pseudomonas aeruginosa PAO1 -
GCF_000146165.2 Shewanella oneidensis MR-1 -
GCF_000007625.1 Clostridium tetani E88 -
GCF_003208375.1 Novosphingobium sp. GV010 -
GCF_003610335.1 Tardiphaga sp. YR296 -
GCF_000009065.1 Yersinia pestis CO92 -
GCF_000039765.1 Vibrio vulnificus CMCP6 -
GCF_003060865.1 Gemmobacter sp. HYN0069 -
GCF_000012265.1 Pseudomonas protegens Pf-5 -
GCF_000196095.1 Vibrio parahaemolyticus RIMD 2210633 -
GCF_000008625.1 Aquifex aeolicus VF5 -
GCF_003390885.1 Pelagibacterium sp. IMCC34151 -
GCF_000011365.1 Bradyrhizobium diazoefficiens USDA 110 -
GCF_000007785.1 Enterococcus faecalis V583 -
GCF_000009145.1 Nitrosomonas europaea ATCC 19718 -
GCF_000745425.1 Beijerinckia mobilis -
GCF_003570885.1 Simplicispira hankyongi -
GCF_003610805.1 Altererythrobacter sp. HN-Y73 -
GCF_003590945.1 Oleomonas sp. K1W22B-8 -
GCF_900156225.1 Ectothiorhodosinus mongolicus +
GCF_000014905.1 Candidatus Solibacter usitatus Ellin6076 -
GCF_000009785.1 Geobacillus kaustophilus HTA426 -
GCF_000204075.1 Trichormus variabilis ATCC 29413 +
GCF_000196115.1 Rhodopirellula baltica SH 1 -
GCF_000011905.1 Dehalococcoides mccartyi 195 -
GCF_000008565.1 Deinococcus radiodurans R1 -
GCF_000007985.2 Geobacter sulfurreducens PCA -
GCF_000008545.1 Thermotoga maritima MSB8 -
GCF_000012865.1 Carboxydothermus hydrogenoformans Z-2901 -
GCF_000012685.1 Myxococcus xanthus DK 1622 -
GCF_000011965.2 Ruegeria pomeroyi DSS-3 -
GCF_900609055.1 Xinfangfangia sp. CIP 111625 -
GCF_000011385.1 Gloeobacter violaceus PCC 7421 +
GCF_900172355.1 Roseisalinus antarcticus -
GCF_000009025.1 Dehalococcoides mccartyi CBDB1 -
GCF_000195775.1 Rhodopseudomonas palustris CGA009 +
GCF_000012205.1 Pseudomonas savastanoi pv. phaseolicola 1448A -
GCF_002878245.1 Komagataeibacter saccharivorans -
GCF_000014185.1 Rubrobacter xylanophilus DSM 9941 -
GCF_000765015.1 Thalassobacter stenotrophicus +
GCF_001556315.1 Porphyrobacter donghaensis +
GCF_000009125.1 Ralstonia solanacearum GMI1000 -
GCF_000010065.1 Synechococcus elongatus PCC 6301 +
GCF_000013085.1 Rhodospirillum rubrum ATCC 11170 +
GCF_000012925.1 Geobacter metallireducens GS-15 -
GCF_000025985.1 Bacteroides fragilis NCTC 9343 -
GCF_000008765.1 Clostridium acetobutylicum ATCC 824 -
GCF_000009205.1 Clostridioides difficile 630 -
GCF_000195795.1 Listeria innocua Clip11262 -
GCF_000195855.1 Mycobacterium leprae TN -
GCF_000021865.1 Rhodobacter capsulatus SB 1003 +
GCF_000012905.2 Rhodobacter sphaeroides 2.4.1 +
GCF_001747405.1 Chlorobaculum limnaeum +
GCF_002017865.1 Rhodoferax fermentans +
GCF_000015165.1 Bradyrhizobium sp. BTAi1 +
GCF_000020465.1 Chlorobium limicola DSM 245 +
GCF_000015125.1 Chlorobium phaeobacteroides DSM 266 +
GCF_000016085.1 Chlorobium phaeovibrioides DSM 265 +
GCF_000013385.1 Anaeromyxobacter dehalogenans 2CP-C -
GCF_000013565.1 Jannaschia sp. CCS1 +
GCF_000016965.1 Clostridium beijerinckii NCIMB 8052 -
GCF_000020625.1 Prosthecochloris aestuarii DSM 271 +
GCF_000014065.1 Ruegeria sp. TM1040 -
GCF_000012745.1 Thiobacillus denitrificans ATCC 25259 -
GCF_003258805.1 Rhodoplanes elegans +
GCF_003258865.1 Rhodoplanes roseus +
GCF_002117815.1 Methylorubrum zatmanii +
GCF_000006605.1 Corynebacterium jeikeium K411 -
GCF_000013045.1 Salinibacter ruber DSM 13855 -
GCF_000016345.1 Polynucleobacter asymbioticus QLW-P1DMWA-1 -
GCF_000011805.1 Aliivibrio fischeri ES114 -
GCF_000013005.1 Erythrobacter litoralis HTCC2594 +
GCF_000153205.1 Nitrococcus mobilis Nb-231 -
GCF_000740745.1 Nitrosococcus oceani C-27 -
GCF_000153125.2 Congregibacter litoralis KT71 +
GCF_000014825.1 Rhodopseudomonas palustris BisA53 +
GCF_000013745.1 Rhodopseudomonas palustris BisB18 +
GCF_000013685.1 Rhodopseudomonas palustris BisB5 +
GCF_000013365.1 Rhodopseudomonas palustris HaA2 +
GCF_000063525.1 Synechococcus sp. RCC307 +
GCF_000012505.1 Synechococcus sp. CC9902 +
GCF_000012605.1 Hydrogenovibrio crunogenus XCL-2 -
GCF_000013985.1 Sphingopyxis alaskensis RB2256 -
GCF_000013765.1 Shewanella denitrificans OS217 -
GCF_000014705.1 Shewanella frigidimarina NCIMB 400 -
GCF_000016585.1 Shewanella putrefaciens CN-32 -
GCF_000012485.1 Pelodictyon luteolum DSM 273 +
GCF_002005465.1 Neoasaia chiangmaiensis -
GCF_000063505.1 Synechococcus sp. WH 7803 +
GCF_000013205.1 Synechococcus sp. JA-3-3Ab +
GCF_000013885.1 Nitrobacter hamburgensis X14 -
GCF_000012725.1 Nitrobacter winogradskyi Nb-255 -
GCF_000012805.1 Nitrosococcus oceani ATCC 19707 -
GCF_000196355.1 Nitrosospira multiformis ATCC 25196 -
GCF_000016065.1 Shewanella loihica PV-4 -
GCF_000018865.1 Chloroflexus aurantiacus J-10-fl +
GCF_000015845.1 Shewanella baltica OS155 -
GCF_000015245.1 Shewanella amazonensis SB2B -
GCF_000058485.1 Frankia alni ACN14a -
GCF_000021945.1 Chloroflexus aggregans DSM 9485 +
GCF_000012345.1 Candidatus Pelagibacter ubique HTCC1062 -
GCF_000017705.1 Vibrio campbellii ATCC BAA-1116 -
GCF_001458435.1 Thalassobius mediterraneus -
GCF_003201955.1 Blastomonas natatoria +
GCF_003258835.1 Rhodobium orientis +
GCF_000012585.1 Chlorobium chlorochromatii CaD3 +
GCF_000009985.1 Magnetospirillum magneticum AMB-1 -
GCF_000016405.1 Rhodobacter sphaeroides ATCC 17025 +
GCF_000015585.1 Halorhodospira halophila SL1 +
GCF_000016725.1 Acidiphilium cryptum JF-5 -
GCF_000012985.1 Hahella chejuensis KCTC 2396 -
GCF_000016365.1 Mycolicibacterium gilvum PYR-GCK -
GCF_000015305.1 Mycolicibacterium vanbaalenii PYR-1 -
GCF_000015365.1 Marinobacter hydrocarbonoclasticus VT8 -
GCF_000016745.1 Geobacter uraniireducens Rf4 -
GCF_000016865.1 Pseudomonas putida F1 -
GCF_900106695.1 Albimonas donghaensis -
GCF_000016665.1 Roseiflexus sp. RS-1 +
GCF_900109295.1 Cognatiyoonia koreensis -
GCF_000015505.1 Polaromonas naphthalenivorans CJ2 -
GCF_003046545.1 Rhodovulum imhoffii +
GCF_000014045.1 Roseobacter denitrificans OCh 114 +
GCF_000168715.1 Chlorobium ferrooxidans DSM 13031 +
GCF_000013785.1 Pseudomonas stutzeri A1501 -
GCF_000009285.1 Cupriavidus necator H16 -
GCF_000017545.1 Fervidobacterium nodosum Rt17-B1 -
GCF_002845745.1 Telmatospirillum siberiense -
GCF_000017805.1 Roseiflexus castenholzii DSM 13941 +
GCF_000026105.1 Pseudomonas entomophila L48 -
GCF_000014125.1 Clostridium novyi NT -
GCF_000010325.1 Nitratiruptor sp. SB155-2 -
GCF_000010345.1 Sulfurovum sp. NBC37-1 -
GCF_900113875.1 Jannaschia pohangensis -
GCF_000016785.1 Thermotoga petrophila RKU-1 -
GCF_000154785.2 Roseobacter litoralis Och 149 +
GCF_000016765.1 Sphingomonas wittichii RW1 -
GCF_000009365.1 Alcanivorax borkumensis SK2 -
GCF_000018285.1 Shewanella pealeana ATCC 700345 -
GCF_000018145.1 Dinoroseobacter shibae DFL 12 = DSM 16493 +
GCF_000016565.1 Pseudomonas mendocina ymp -
GCF_000017565.1 Parvibaculum lavamentivorans DS-1 -
GCF_000017505.1 Anaeromyxobacter sp. Fw109-5 -
GCF_900110585.1 Aquisalimonas asiatica -
GCF_000505765.1 Asaia sp. SF2.1 -
GCF_000824825.2 Mesorhizobium sp. ORS 3324 -
GCF_000154705.2 Hoeflea phototrophica DFL-43 +
GCF_000010405.1 Candidatus Vesicomyosocius okutanii -
GCF_900102855.1 Thiohalomonas denitrificans -
GCF_900104305.1 Filomicrobium insigne -
GCF_000018845.1 Methylorubrum extorquens PA1 -
GCF_000016145.1 Mycobacterium tuberculosis H37Ra -
GCF_000015745.1 Geobacillus thermodenitrificans NG80-2 -
GCF_000015725.1 Methylibium petroleiphilum PM1 +
GCF_002797915.1 Yoonia maricola -
GCF_000018025.1 Shewanella sediminis HAW-EB3 -
GCF_000019725.1 Methylobacterium radiotolerans JCM 2831 -
GCF_002844445.1 Rhodobacter azotoformans +
GCF_000016505.1 Clostridium kluyveri DSM 555 -
GCF_002276555.1 Acetobacter fabarum -
GCF_000943805.1 Sphingobium sp. YBL2 -
GCF_002115725.1 Marivita cryptomonadis -
GCF_000020505.1 Chlorobaculum parvum NCIB 8327 +
GCF_000020525.1 Chloroherpeton thalassium ATCC 35110 +
GCF_900156265.1 Acidiphilium rubrum +
GCF_003337735.1 Thioalbus denitrificans -
GCF_000686045.1 Fodinicurvata fenggangensis DSM 21160 -
GCF_900099935.1 Pseudoruegeria lutimaris -
GCF_000025485.1 Allochromatium vinosum DSM 180 +
GCF_900092655.1 Candidatus Thiosymbion oneisti -
GCF_002155695.1 Porphyrobacter tepidarius +
GCF_000046845.1 Acinetobacter baylyi ADP1 -
GCF_000496075.1 Lutibaculum baratangense AMV1 -
GCF_000236665.1 Azospira oryzae PS -
GCF_000014585.1 Synechococcus sp. CC9311 +
GCF_003550065.1 Hephaestia caeni -
GCF_000166055.1 Rhodomicrobium vannielii ATCC 17100 +
GCF_900110775.1 Litorimicrobium taeanense -
GCF_001305515.1 Prosthecomicrobium hirschii -
GCF_003385775.1 Parasphingopyxis lamellibrachiae -
GCF_000176355.1 Citromicrobium bathyomarinum JL354 +
GCF_003208435.1 Pelagimonas varians -
GCF_001890925.1 Planktotalea frisia -
GCF_003116015.1 Azospirillum sp. TSO22-1 -
GCF_000971275.1 Devosia psychrophila -
GCF_001247715.1 Roseovarius tolerans +
GCF_000025965.1 Aromatoleum aromaticum EbN1 -
GCF_000152145.1 Oscillochloris trichoides DG-6 +
GCF_000227745.2 Thiocystis violascens DSM 198 +
GCF_000227725.1 Thiorhodospira sibirica ATCC 700588 +
GCF_000259095.1 Citreicella sp. 357 -
GCF_001483865.1 Roseateles depolymerans +
GCF_900156605.1 Insolitispirillum peregrinum -
GCF_000195955.2 Mycobacterium tuberculosis H37Rv -
GCF_000195975.1 Synechococcus sp. WH 8102 +
GCF_002284935.1 Candidatus Dactylopiibacterium carminicum -
GCF_000636015.1 Rhodomicrobium udaipurense JA643 +
GCF_003664325.1 Alkalispirillum mobile -
GCF_900107585.1 Rubrimonas cliftonensis +
GCF_000202835.1 Acidiphilium multivorum AIU301 -
GCF_900115815.1 Roseivivax halotolerans +
GCF_000203935.1 Shewanella sp. ANA-3 -
GCF_002723995.1 Gluconobacter kondonii -
GCF_000226295.1 Chloracidobacterium thermophilum B +
GCF_000006945.2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 -