Metamenu

Model weights by orthologous groups

For each model, the rank and weight of this orthologous group are given. These reflect the predictive weight of this protein family for the different traits. Positive weights indicate that the presence of this orthologous group is indicative for the trait. Negative weights indicate that the absence of this orthologous group is indicative for the trait.

rank in model enog score model name model description
16 0.020027 Fermentative Organism has a Fermentative lifestyle
40 0.010923 NOB Organism is part of the clade of nitrite-oxidizing bacteria (E)
191 -0.015837 but Organism is producing butyric_acid
221 -0.026123 for Organism is producing formic_acid
232 -0.021024 h2 Organism is producing hydrogen
235 -0.027423 etoh Organism is producing ethanol
262 -0.010358 nonfermentative Organism has a nonfermentative lifestyle
314 -0.017398 actn_R Organism is producing R_acetoin
368 -0.010146 AUTO Organism is capable of growth with CO2 as sole carbon source (C)
387 0.009453 Sulfate_reducer Organism is capable of using sulfate as terminal electron acceptor (T)
474 0.014916 nif Organism is capable of fixing N2 (E)
604 0.009979 THERM_OR_TOLERANT Organism has a thermophilic lifestyle or is thermotolerant (C)
826 0.007190 glc_D Organism is utilizing D_glucose
837 -0.009757 isoval Organism is producing isovaleric_acid
998 -0.003721 isobut Organism is producing isobutyric_acid
1003 -0.011852 motility Organism is capable of self-propelled motion (T)
1013 0.007430 T6SS Organism expresses a Type VI secretion system (C)
1041 0.005514 HALO Organism has a halophilic lifestyle (C)
1064 0.012476 gram_stain Cells of organism stain Gram-positive (+) or Gram-negative (-) (T)
2537 -0.008305 ac Organism is producing acetic_acid
14552 0.001268 Aerobe Organism is capable of aerobic respiration (T)