Metamenu

Model weights by orthologous groups

For each model, the rank and weight of this orthologous group are given. These reflect the predictive weight of this protein family for the different traits. Positive weights indicate that the presence of this orthologous group is indicative for the trait. Negative weights indicate that the absence of this orthologous group is indicative for the trait.

rank in model enog score model name model description
42 -0.029450 h2 Organism is producing hydrogen
57 -0.016783 T3SS Organism expresses a Type III secretion system (C)
61 -0.018960 THERM Organism has a thermophilic lifestyle (C)
62 -0.037412 etoh Organism is producing ethanol
108 -0.022228 actn_R Organism is producing R_acetoin
137 -0.016466 THERM_OR_TOLERANT Organism has a thermophilic lifestyle or is thermotolerant (C)
188 -0.017043 indole Organism is producing indole
202 -0.012722 glc_D Organism is utilizing D_glucose
409 -0.006641 NOB Organism is part of the clade of nitrite-oxidizing bacteria (E)
412 0.012834 T6SS Organism expresses a Type VI secretion system (C)
421 -0.007543 Aerobe Organism is capable of aerobic respiration (T)
481 -0.007331 nonfermentative Organism has a nonfermentative lifestyle
486 0.014761 nif Organism is capable of fixing N2 (E)
539 -0.012069 lac_D Organism is producing D_lactic_acid
636 0.015833 lac_L Organism is producing L_lactic_acid
873 0.006227 PSYCHRO Organism has a psychrophilic lifestyle (C)
942 -0.005461 Sulfate_reducer Organism is capable of using sulfate as terminal electron acceptor (T)
1007 -0.013194 gram_stain Cells of organism stain Gram-positive (+) or Gram-negative (-) (T)
1109 0.005037 HALO Organism has a halophilic lifestyle (C)
1159 -0.007915 phototrophy
1494 0.009004 Saccharolytic Organism has a Saccharolytic lifestyle
1696 0.010012 ac Organism is producing acetic_acid
2898 -0.003673 sporulation Organism is capable of producing endospores for persistence (T)