Metamenu

Model weights by orthologous groups

For each model, the rank and weight of this orthologous group are given. These reflect the predictive weight of this protein family for the different traits. Positive weights indicate that the presence of this orthologous group is indicative for the trait. Negative weights indicate that the absence of this orthologous group is indicative for the trait.

rank in model enog score model name model description
5 0.021227 Sulfate_reducer Organism is capable of using sulfate as terminal electron acceptor (T)
6 0.096548 nif Organism is capable of fixing N2 (E)
7 0.049709 phototrophy
136 -0.016490 T4SS Organism expresses a Type IV secretion system (C)
301 -0.007430 NOB Organism is part of the clade of nitrite-oxidizing bacteria (E)
305 0.007134 METHANOTROPH Organism is capable of growth with methane as the sole carbon source (C)
378 0.010085 AUTO Organism is capable of growth with CO2 as sole carbon source (C)
402 -0.012451 Asaccharolytic Organism has a Asaccharolytic lifestyle
441 -0.008030 nonfermentative Organism has a nonfermentative lifestyle
556 0.021295 etoh Organism is producing ethanol
601 0.004718 btoh Organism is producing 1_butanol
712 0.009054 Fermentative Organism has a Fermentative lifestyle
742 0.014954 lac_L Organism is producing L_lactic_acid
1136 0.004743 HALO Organism has a halophilic lifestyle (C)
1204 -0.009101 lac_D Organism is producing D_lactic_acid
1271 0.008133 sporulation Organism is capable of producing endospores for persistence (T)
1492 0.008267 Anaerobe Organism is capable of anaerobic respiration (T)
2252 -0.003562 Aerobe Organism is capable of aerobic respiration (T)
2986 0.005487 succ Organism is producing succinic_acid