Metamenu

Model weights by orthologous groups

For each model, the rank and weight of this orthologous group are given. These reflect the predictive weight of this protein family for the different traits. Positive weights indicate that the presence of this orthologous group is indicative for the trait. Negative weights indicate that the absence of this orthologous group is indicative for the trait.

rank in model enog score model name model description
16 -0.021147 T3SS Organism expresses a Type III secretion system (C)
91 -0.018524 T6SS Organism expresses a Type VI secretion system (C)
137 0.016795 Anaerobe Organism is capable of anaerobic respiration (T)
339 -0.021020 gram_stain Cells of organism stain Gram-positive (+) or Gram-negative (-) (T)
397 -0.018213 lac_L Organism is producing L_lactic_acid
439 0.003901 ARCHAEA Organism is an archaeon (C)
479 -0.006321 NOB Organism is part of the clade of nitrite-oxidizing bacteria (E)
578 -0.021067 etoh Organism is producing ethanol
613 -0.012303 succ Organism is producing succinic_acid
666 0.010362 sporulation Organism is capable of producing endospores for persistence (T)
708 -0.010871 lac_D Organism is producing D_lactic_acid
736 0.010414 phototrophy
829 -0.006874 PSYCHRO Organism has a psychrophilic lifestyle (C)
852 -0.005535 Aerobe Organism is capable of aerobic respiration (T)
886 -0.004178 METHANOTROPH Organism is capable of growth with methane as the sole carbon source (C)
902 -0.008598 but Organism is producing butyric_acid
2571 0.006573 motility Organism is capable of self-propelled motion (T)
2651 -0.008074 ac Organism is producing acetic_acid