Metamenu

Model weights by orthologous groups

For each model, the rank and weight of this orthologous group are given. These reflect the predictive weight of this protein family for the different traits. Positive weights indicate that the presence of this orthologous group is indicative for the trait. Negative weights indicate that the absence of this orthologous group is indicative for the trait.

rank in model enog score model name model description
22 -0.024911 lac_D Organism is producing D_lactic_acid
48 0.016134 Aerobe Organism is capable of aerobic respiration (T)
66 0.024538 ac Organism is producing acetic_acid
105 -0.019310 indole Organism is producing indole
227 -0.017576 Saccharolytic Organism has a Saccharolytic lifestyle
298 -0.013929 but Organism is producing butyric_acid
383 0.024057 etoh Organism is producing ethanol
464 -0.012201 phototrophy
484 -0.014761 nif Organism is capable of fixing N2 (E)
558 0.019811 for Organism is producing formic_acid
778 0.004796 METHANOTROPH Organism is capable of growth with methane as the sole carbon source (C)
795 -0.007205 PSYCHRO Organism has a psychrophilic lifestyle (C)
838 -0.003950 AOB Organism is part of the clade of ammonia-oxidizing bacteria (E)
957 0.005102 nonfermentative Organism has a nonfermentative lifestyle
986 0.004132 Sulfate_reducer Organism is capable of using sulfate as terminal electron acceptor (T)
1286 -0.007170 gram_stain Cells of organism stain Gram-positive (+) or Gram-negative (-) (T)
2221 0.006600 Anaerobe Organism is capable of anaerobic respiration (T)
2348 0.007214 succ Organism is producing succinic_acid
2748 0.005025 sporulation Organism is capable of producing endospores for persistence (T)