Metamenu

Model weights by orthologous groups

For each model, the rank and weight of this orthologous group are given. These reflect the predictive weight of this protein family for the different traits. Positive weights indicate that the presence of this orthologous group is indicative for the trait. Negative weights indicate that the absence of this orthologous group is indicative for the trait.

rank in model enog score model name model description
31 0.027709 Aerobe Organism is capable of aerobic respiration (T)
31 -0.041851 gram_stain Cells of organism stain Gram-positive (+) or Gram-negative (-) (T)
48 -0.026192 motility Organism is capable of self-propelled motion (T)
111 0.009397 NOB Organism is part of the clade of nitrite-oxidizing bacteria (E)
158 0.020212 actn_R Organism is producing R_acetoin
192 -0.016196 phototrophy
204 -0.016809 indole Organism is producing indole
243 -0.025393 for Organism is producing formic_acid
345 -0.024764 etoh Organism is producing ethanol
345 0.006909 METHANOTROPH Organism is capable of growth with methane as the sole carbon source (C)
418 0.004045 ARCHAEA Organism is an archaeon (C)
696 0.010223 sporulation Organism is capable of producing endospores for persistence (T)
710 0.009250 T3SS Organism expresses a Type III secretion system (C)
828 -0.007170 glc_D Organism is utilizing D_glucose
998 0.006035 T4SS Organism expresses a Type IV secretion system (C)
1308 -0.007200 Fermentative Organism has a Fermentative lifestyle
1563 -0.011350 lac_L Organism is producing L_lactic_acid
5761 0.004383 lac_D Organism is producing D_lactic_acid