Model weights by orthologous groups
For each model, the rank and weight of this orthologous group are given. These reflect the predictive weight of this protein family for the different traits. Positive weights indicate that the presence of this orthologous group is indicative for the trait. Negative weights indicate that the absence of this orthologous group is indicative for the trait.
rank in model | enog score | model name | model description |
---|---|---|---|
22 | -0.020416 | T3SS | Organism expresses a Type III secretion system (C) |
126 | 0.017491 | T6SS | Organism expresses a Type VI secretion system (C) |
279 | 0.015923 | succ | Organism is producing succinic_acid |
309 | 0.007366 | NOB | Organism is part of the clade of nitrite-oxidizing bacteria (E) |
355 | -0.010688 | glc_D | Organism is utilizing D_glucose |
395 | -0.016137 | motility | Organism is capable of self-propelled motion (T) |
536 | -0.011675 | phototrophy | |
605 | 0.007660 | HALO | Organism has a halophilic lifestyle (C) |
791 | -0.004660 | METHANOTROPH | Organism is capable of growth with methane as the sole carbon source (C) |
930 | 0.013922 | gram_stain | Cells of organism stain Gram-positive (+) or Gram-negative (-) (T) |
931 | 0.006829 | THERM_OR_TOLERANT | Organism has a thermophilic lifestyle or is thermotolerant (C) |
978 | -0.004070 | AUTO | Organism is capable of growth with CO2 as sole carbon source (C) |
1539 | 0.004322 | Aerobe | Organism is capable of aerobic respiration (T) |
4107 | 0.005571 | lac_D | Organism is producing D_lactic_acid |