Metamenu

Model weights by orthologous groups

For each model, the rank and weight of this orthologous group are given. These reflect the predictive weight of this protein family for the different traits. Positive weights indicate that the presence of this orthologous group is indicative for the trait. Negative weights indicate that the absence of this orthologous group is indicative for the trait.

rank in model enog score model name model description
106 0.017428 Anaerobe Organism is capable of anaerobic respiration (T)
168 0.013675 T3SS Organism expresses a Type III secretion system (C)
216 0.027987 etoh Organism is producing ethanol
230 0.021139 lac_L Organism is producing L_lactic_acid
235 0.016224 indole Organism is producing indole
299 -0.013252 sporulation Organism is capable of producing endospores for persistence (T)
397 0.009927 AUTO Organism is capable of growth with CO2 as sole carbon source (C)
474 -0.011987 but Organism is producing butyric_acid
593 -0.005817 NOB Organism is part of the clade of nitrite-oxidizing bacteria (E)
697 -0.013559 motility Organism is capable of self-propelled motion (T)
1008 0.010401 succ Organism is producing succinic_acid
1067 -0.006255 T6SS Organism expresses a Type VI secretion system (C)
1108 0.015586 for Organism is producing formic_acid
1836 0.007736 lac_D Organism is producing D_lactic_acid