Model weights by orthologous groups
For each model, the rank and weight of this orthologous group are given. These reflect the predictive weight of this protein family for the different traits. Positive weights indicate that the presence of this orthologous group is indicative for the trait. Negative weights indicate that the absence of this orthologous group is indicative for the trait.
rank in model | enog score | model name | model description |
---|---|---|---|
25 | 0.026977 | T6SS | Organism expresses a Type VI secretion system (C) |
59 | 0.032435 | gram_stain | Cells of organism stain Gram-positive (+) or Gram-negative (-) (T) |
89 | 0.015360 | T3SS | Organism expresses a Type III secretion system (C) |
97 | -0.025387 | h2 | Organism is producing hydrogen |
151 | -0.008614 | METHANOTROPH | Organism is capable of growth with methane as the sole carbon source (C) |
198 | -0.019026 | nif | Organism is capable of fixing N2 (E) |
217 | -0.017029 | succ | Organism is producing succinic_acid |
297 | 0.013161 | T4SS | Organism expresses a Type IV secretion system (C) |
299 | -0.013935 | phototrophy | |
330 | -0.009442 | HALO | Organism has a halophilic lifestyle (C) |
374 | -0.010383 | PSYCHRO | Organism has a psychrophilic lifestyle (C) |
498 | 0.006218 | NOB | Organism is part of the clade of nitrite-oxidizing bacteria (E) |
544 | -0.009068 | glc_D | Organism is utilizing D_glucose |
578 | 0.011539 | Anaerobe | Organism is capable of anaerobic respiration (T) |
599 | 0.014279 | actn_R | Organism is producing R_acetoin |
834 | 0.011750 | Saccharolytic | Organism has a Saccharolytic lifestyle |
1298 | 0.014600 | for | Organism is producing formic_acid |
1681 | 0.006446 | Fermentative | Organism has a Fermentative lifestyle |
18393 | -0.000950 | Aerobe | Organism is capable of aerobic respiration (T) |