Metamenu

Model weights by orthologous groups

For each model, the rank and weight of this orthologous group are given. These reflect the predictive weight of this protein family for the different traits. Positive weights indicate that the presence of this orthologous group is indicative for the trait. Negative weights indicate that the absence of this orthologous group is indicative for the trait.

rank in model enog score model name model description
25 0.026977 T6SS Organism expresses a Type VI secretion system (C)
59 0.032435 gram_stain Cells of organism stain Gram-positive (+) or Gram-negative (-) (T)
89 0.015360 T3SS Organism expresses a Type III secretion system (C)
97 -0.025387 h2 Organism is producing hydrogen
151 -0.008614 METHANOTROPH Organism is capable of growth with methane as the sole carbon source (C)
198 -0.019026 nif Organism is capable of fixing N2 (E)
217 -0.017029 succ Organism is producing succinic_acid
297 0.013161 T4SS Organism expresses a Type IV secretion system (C)
299 -0.013935 phototrophy
330 -0.009442 HALO Organism has a halophilic lifestyle (C)
374 -0.010383 PSYCHRO Organism has a psychrophilic lifestyle (C)
498 0.006218 NOB Organism is part of the clade of nitrite-oxidizing bacteria (E)
544 -0.009068 glc_D Organism is utilizing D_glucose
578 0.011539 Anaerobe Organism is capable of anaerobic respiration (T)
599 0.014279 actn_R Organism is producing R_acetoin
834 0.011750 Saccharolytic Organism has a Saccharolytic lifestyle
1298 0.014600 for Organism is producing formic_acid
1681 0.006446 Fermentative Organism has a Fermentative lifestyle
18393 -0.000950 Aerobe Organism is capable of aerobic respiration (T)