Metamenu

Model weights by orthologous groups

For each model, the rank and weight of this orthologous group are given. These reflect the predictive weight of this protein family for the different traits. Positive weights indicate that the presence of this orthologous group is indicative for the trait. Negative weights indicate that the absence of this orthologous group is indicative for the trait.

rank in model enog score model name model description
1 0.054525 lac_D Organism is producing D_lactic_acid
16 -0.013915 METHANOTROPH Organism is capable of growth with methane as the sole carbon source (C)
36 0.032755 lac_L Organism is producing L_lactic_acid
106 -0.009427 NOB Organism is part of the clade of nitrite-oxidizing bacteria (E)
117 0.017123 sporulation Organism is capable of producing endospores for persistence (T)
135 0.026692 gram_stain Cells of organism stain Gram-positive (+) or Gram-negative (-) (T)
313 -0.012113 T3SS Organism expresses a Type III secretion system (C)
315 -0.016742 ac Organism is producing acetic_acid
364 0.015295 isobut Organism is producing isobutyric_acid
480 0.012080 Anaerobe Organism is capable of anaerobic respiration (T)
485 -0.010062 THERM Organism has a thermophilic lifestyle (C)
517 -0.014907 motility Organism is capable of self-propelled motion (T)
676 -0.005305 SYMBIONT Organism has an obligate intracellular lifestyle (C)
726 -0.009035 THERM_OR_TOLERANT Organism has a thermophilic lifestyle or is thermotolerant (C)
742 -0.012265 Saccharolytic Organism has a Saccharolytic lifestyle
1099 0.009585 h2 Organism is producing hydrogen
3679 0.002890 Aerobe Organism is capable of aerobic respiration (T)