Metamenu

Model weights by orthologous groups

For each model, the rank and weight of this orthologous group are given. These reflect the predictive weight of this protein family for the different traits. Positive weights indicate that the presence of this orthologous group is indicative for the trait. Negative weights indicate that the absence of this orthologous group is indicative for the trait.

rank in model enog score model name model description
156 0.012300 nonfermentative Organism has a nonfermentative lifestyle
185 -0.013378 T3SS Organism expresses a Type III secretion system (C)
209 -0.021850 h2 Organism is producing hydrogen
255 -0.007554 METHANOTROPH Organism is capable of growth with methane as the sole carbon source (C)
474 0.009405 AUTO Organism is capable of growth with CO2 as sole carbon source (C)
522 -0.011164 sporulation Organism is capable of producing endospores for persistence (T)
568 -0.011541 T6SS Organism expresses a Type VI secretion system (C)
572 0.011448 Asaccharolytic Organism has a Asaccharolytic lifestyle
634 -0.005637 NOB Organism is part of the clade of nitrite-oxidizing bacteria (E)
760 0.015639 gram_stain Cells of organism stain Gram-positive (+) or Gram-negative (-) (T)
803 -0.007474 glc_D Organism is utilizing D_glucose
848 0.009665 isoval Organism is producing isovaleric_acid
972 0.012074 ac Organism is producing acetic_acid
1503 -0.006786 Fermentative Organism has a Fermentative lifestyle
1601 0.008030 Anaerobe Organism is capable of anaerobic respiration (T)
1638 -0.004185 Aerobe Organism is capable of aerobic respiration (T)
2272 0.009441 lac_L Organism is producing L_lactic_acid