Metamenu

Model weights by orthologous groups

For each model, the rank and weight of this orthologous group are given. These reflect the predictive weight of this protein family for the different traits. Positive weights indicate that the presence of this orthologous group is indicative for the trait. Negative weights indicate that the absence of this orthologous group is indicative for the trait.

rank in model enog score model name model description
53 0.021757 phototrophy
117 0.007099 ARCHAEA Organism is an archaeon (C)
178 -0.013028 glc_D Organism is utilizing D_glucose
184 -0.007484 AOB Organism is part of the clade of ammonia-oxidizing bacteria (E)
283 -0.017790 actn_R Organism is producing R_acetoin
431 0.010565 THERM Organism has a thermophilic lifestyle (C)
435 0.011515 THERM_OR_TOLERANT Organism has a thermophilic lifestyle or is thermotolerant (C)
446 -0.022788 etoh Organism is producing ethanol
525 0.016732 lac_L Organism is producing L_lactic_acid
539 0.014258 nif Organism is capable of fixing N2 (E)
543 -0.020076 for Organism is producing formic_acid
687 0.004547 btoh Organism is producing 1_butanol
724 -0.006946 HALO Organism has a halophilic lifestyle (C)
769 0.010442 Anaerobe Organism is capable of anaerobic respiration (T)
1171 0.006194 T3SS Organism expresses a Type III secretion system (C)
1176 0.008430 sporulation Organism is capable of producing endospores for persistence (T)
1210 0.009094 lac_D Organism is producing D_lactic_acid
2947 0.005737 succ Organism is producing succinic_acid
19363 0.000254 Aerobe Organism is capable of aerobic respiration (T)