Metamenu

Model weights by orthologous groups

For each model, the rank and weight of this orthologous group are given. These reflect the predictive weight of this protein family for the different traits. Positive weights indicate that the presence of this orthologous group is indicative for the trait. Negative weights indicate that the absence of this orthologous group is indicative for the trait.

rank in model enog score model name model description
2 0.022884 Sulfate_reducer Organism is capable of using sulfate as terminal electron acceptor (T)
62 -0.029558 lac_L Organism is producing L_lactic_acid
104 -0.009418 METHANOTROPH Organism is capable of growth with methane as the sole carbon source (C)
116 0.018291 phototrophy
131 -0.012205 Aerobe Organism is capable of aerobic respiration (T)
146 0.006801 ARCHAEA Organism is an archaeon (C)
279 -0.013439 sporulation Organism is capable of producing endospores for persistence (T)
318 -0.006110 AOB Organism is part of the clade of ammonia-oxidizing bacteria (E)
340 0.024827 etoh Organism is producing ethanol
412 0.010189 glc_D Organism is utilizing D_glucose
489 0.007217 nonfermentative Organism has a nonfermentative lifestyle
518 0.009232 PSYCHRO Organism has a psychrophilic lifestyle (C)
726 -0.012132 nif Organism is capable of fixing N2 (E)
744 0.009085 T3SS Organism expresses a Type III secretion system (C)
788 -0.012683 actn_R Organism is producing R_acetoin
998 -0.004744 isoval Organism is producing isovaleric_acid
1041 0.012799 gram_stain Cells of organism stain Gram-positive (+) or Gram-negative (-) (T)
1293 -0.007251 Fermentative Organism has a Fermentative lifestyle
1499 0.010140 motility Organism is capable of self-propelled motion (T)
3083 -0.002575 succ Organism is producing succinic_acid