Metamenu

Model weights by orthologous groups

For each model, the rank and weight of this orthologous group are given. These reflect the predictive weight of this protein family for the different traits. Positive weights indicate that the presence of this orthologous group is indicative for the trait. Negative weights indicate that the absence of this orthologous group is indicative for the trait.

rank in model enog score model name model description
7 -0.014007 NOB Organism is part of the clade of nitrite-oxidizing bacteria (E)
43 -0.018143 Aerobe Organism is capable of aerobic respiration (T)
74 -0.023875 motility Organism is capable of self-propelled motion (T)
215 -0.013023 T3SS Organism expresses a Type III secretion system (C)
235 0.018010 ac Organism is producing acetic_acid
259 0.018169 actn_R Organism is producing R_acetoin
315 0.013657 phototrophy
413 0.014861 isobut Organism is producing isobutyric_acid
467 0.012890 isoval Organism is producing isovaleric_acid
474 0.008430 HALO Organism has a halophilic lifestyle (C)
485 0.022136 etoh Organism is producing ethanol
495 0.014677 nif Organism is capable of fixing N2 (E)
590 -0.005836 SYMBIONT Organism has an obligate intracellular lifestyle (C)
646 0.009619 THERM_OR_TOLERANT Organism has a thermophilic lifestyle or is thermotolerant (C)
814 -0.009701 T6SS Organism expresses a Type VI secretion system (C)
832 0.007635 THERM Organism has a thermophilic lifestyle (C)
861 0.006392 PSYCHRO Organism has a psychrophilic lifestyle (C)
934 0.007406 T4SS Organism expresses a Type IV secretion system (C)
961 0.004885 nonfermentative Organism has a nonfermentative lifestyle
2572 -0.008362 lac_L Organism is producing L_lactic_acid
2582 -0.006603 succ Organism is producing succinic_acid