Metamenu

Model weights by orthologous groups

For each model, the rank and weight of this orthologous group are given. These reflect the predictive weight of this protein family for the different traits. Positive weights indicate that the presence of this orthologous group is indicative for the trait. Negative weights indicate that the absence of this orthologous group is indicative for the trait.

rank in model enog score model name model description
2 0.024818 glc_D Organism is utilizing D_glucose
17 0.020715 AUTO Organism is capable of growth with CO2 as sole carbon source (C)
21 0.026941 indole Organism is producing indole
32 -0.024195 succ Organism is producing succinic_acid
102 0.018384 lac_D Organism is producing D_lactic_acid
118 0.009253 NOB Organism is part of the clade of nitrite-oxidizing bacteria (E)
190 0.018412 Saccharolytic Organism has a Saccharolytic lifestyle
200 -0.015982 phototrophy
210 0.018689 nif Organism is capable of fixing N2 (E)
317 -0.015840 isobut Organism is producing isobutyric_acid
424 -0.013233 isoval Organism is producing isovaleric_acid
515 -0.011775 Asaccharolytic Organism has a Asaccharolytic lifestyle
519 -0.009224 PSYCHRO Organism has a psychrophilic lifestyle (C)
536 -0.020153 for Organism is producing formic_acid
661 0.010382 sporulation Organism is capable of producing endospores for persistence (T)
690 0.007518 Sulfate_reducer Organism is capable of using sulfate as terminal electron acceptor (T)
747 -0.010526 Anaerobe Organism is capable of anaerobic respiration (T)
766 0.004129 btoh Organism is producing 1_butanol
794 0.004651 METHANOTROPH Organism is capable of growth with methane as the sole carbon source (C)
1039 -0.005108 Aerobe Organism is capable of aerobic respiration (T)
1079 0.011729 ac Organism is producing acetic_acid