Metamenu

Model weights by orthologous groups

For each model, the rank and weight of this orthologous group are given. These reflect the predictive weight of this protein family for the different traits. Positive weights indicate that the presence of this orthologous group is indicative for the trait. Negative weights indicate that the absence of this orthologous group is indicative for the trait.

rank in model enog score model name model description
10 0.027745 T3SS Organism expresses a Type III secretion system (C)
43 -0.027739 nif Organism is capable of fixing N2 (E)
154 0.015906 T4SS Organism expresses a Type IV secretion system (C)
164 -0.020023 actn_R Organism is producing R_acetoin
168 -0.013141 glc_D Organism is utilizing D_glucose
176 -0.013067 PSYCHRO Organism has a psychrophilic lifestyle (C)
204 -0.015850 phototrophy
221 0.008080 NOB Organism is part of the clade of nitrite-oxidizing bacteria (E)
334 -0.013315 Anaerobe Organism is capable of anaerobic respiration (T)
361 -0.019152 h2 Organism is producing hydrogen
822 0.006912 AUTO Organism is capable of growth with CO2 as sole carbon source (C)
916 0.005927 Sulfate_reducer Organism is capable of using sulfate as terminal electron acceptor (T)
981 -0.006841 THERM Organism has a thermophilic lifestyle (C)
2053 -0.003762 Aerobe Organism is capable of aerobic respiration (T)
5566 0.004570 lac_D Organism is producing D_lactic_acid