Metamenu

Model weights by orthologous groups

For each model, the rank and weight of this orthologous group are given. These reflect the predictive weight of this protein family for the different traits. Positive weights indicate that the presence of this orthologous group is indicative for the trait. Negative weights indicate that the absence of this orthologous group is indicative for the trait.

rank in model enog score model name model description
17 0.033509 phototrophy
28 0.016730 HALO Organism has a halophilic lifestyle (C)
34 -0.037550 for Organism is producing formic_acid
75 -0.036205 etoh Organism is producing ethanol
138 -0.016459 T4SS Organism expresses a Type IV secretion system (C)
361 -0.007246 SYMBIONT Organism has an obligate intracellular lifestyle (C)
375 -0.005864 AOB Organism is part of the clade of ammonia-oxidizing bacteria (E)
442 -0.010932 T3SS Organism expresses a Type III secretion system (C)
565 -0.008283 Sulfate_reducer Organism is capable of using sulfate as terminal electron acceptor (T)
613 -0.011189 T6SS Organism expresses a Type VI secretion system (C)
739 -0.004318 btoh Organism is producing 1_butanol
809 0.006987 AUTO Organism is capable of growth with CO2 as sole carbon source (C)
964 0.004597 PSYCHRO Organism has a psychrophilic lifestyle (C)
1035 -0.011648 h2 Organism is producing hydrogen
2523 0.002911 Anaerobe Organism is capable of anaerobic respiration (T)
2607 0.006551 succ Organism is producing succinic_acid
3423 0.003139 Fermentative Organism has a Fermentative lifestyle
4435 -0.005340 lac_D Organism is producing D_lactic_acid
16132 0.001131 Aerobe Organism is capable of aerobic respiration (T)